When We Met Other Human Species

In the light of the new Nobel Prize nomination of Svante Pääbo it is nice to watch these youtube titles. The first one is from PBS, and offers a nice summary without too much scientific jargon or baggage. The next title is presented by Svante Pääbo that was the presentation that I saw at the… Read More »

Chateaubriand Fellowship for PhD students

Chateaubriand Fellowship The Chateaubriand Fellowship allows PhD students registered in an American university the opportunity to spend 4–9 months in France. The fellowship aims to initiate or reinforce collaborations or join projects between French and American research teams. US citizenship is not required (see eligibility and guidelines.) Summary French Government funded Chateaubriand STEM Fellowship available… Read More »

A Picture is Worth a Thousand Words: Making Science More Engaging

A webinar from “The Scientist“ Announcement and recording of event: A-Picture-is-Worth-a-Thousand-Words-Making-Science-More-Engaging About this webinar: Given that humans are by nature visual animals, most people are familiar with the concept of visual communication. However, while writing their articles and giving presentations, scientists frequently overlook aesthetic appeal because they believe it to be irrelevant or because they… Read More »

Where is VirusWorld?

Virusworld was started as an anonymous FTP site in 1993 to distribute virus images I created from X-ray crystallography data, primarily for teaching. After 29 years the site has been retired, in part due to change of web server. I wrote a page about this elsewhere, but here is the summary below: Summary VirusWorld was… Read More »

DataChat: Guided English Language© Ai and ML data analysis

A new spin-off company from the University of Wisconsin-Madison proposes a new interface for data analysis based on Guided English Language© (GEL) to command Artificial Intelligence and Machine Learning methods via “utterances” i.e. English-like phrases easier to write than code whether R, python, SQL, or other traditional tools. The web site is at datachat.ai The… Read More »

semester-biology informatics courses

Just found this interesting set of  “semester-biology ” (bio)informatics courses, from the original data carpentry site: Web rendered: https://datacarpentry.org/semester-biology/ GitHub: https://github.com/datacarpentry/semester-biology Derived works: Data Science for Biologists at Virginia Commonwealth University Data Science for Agriculture at Oklahoma State University Data Visualization for Plant Pathologists at the University of Florida Data Science for SAFS at the University of… Read More »

Computing residues per turn in an alpha helix

Last month I wrote a blog on my Biochemistry Blog about computing the number of residues within an alpha helix. This was in relation to a project concerning predicting a “coiled-coil” structure. It was more complicated than I thought. The link to the original article is here: Computing residues per turn in an alpha helix… Read More »